BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036A04LP1|AL430148
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1549 1292 0.0
3x_Contig1359 550 e-156
>3x_Contig1549
Length = 13677
Score = 1292 bits (651), Expect = 0.0
Identities = 662/665 (99%), Gaps = 1/665 (0%)
Strand = Plus / Minus
Query: 1 gatccccatcgatgcggcataatttagcaatgccttgtccaaaaacatcaataggtacgt 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 664 gatccccatcgatgcggcataatttaacaatgccttgtccaaaaacatcaataggtacgt 605
Query: 61 acagcataaaaatggcaaaacaaatatgtcaagctttctcaacaccttcttatctaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acagcataaaaatggcaaaacaaatatgtcaagctttctcaacaccttcttatctaacac 545
Query: 121 atggttcccaaagaaagttgtcttctctgtwatatcttcctgttcgatgctcttatcgtc 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 544 atggttcccaaagaaagttgtcttctctgtaatatcttcctgttcgatgctcttatcgtc 485
Query: 181 cttcaactcggccgctgcggaacttagaaggaactttctagctacatcttcctcatcgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cttcaactcggccgctgcggaacttagaaggaactttctagctacatcttcctcatcgct 425
Query: 241 tacggaataaacagactcactgagatcttctttatctggcatcttttctggtttgcctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tacggaataaacagactcactgagatcttctttatctggcatcttttctggtttgcctat 365
Query: 301 cttgttgacttcgttctattatttttaaattggggacatatcttcaaatttaccagggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cttgttgacttcgttctattatttttaaattggggacatatcttcaaatttaccagggag 305
Query: 361 gtaattcgattcatacttcgatccgatgaggttcttttatacttctcgatccgtccaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtaattcgattcatacttcgatccgatgaggttcttttatacttctcgatccgtccaaag 245
Query: 421 attcattccgattcctaaaccactaaaggtaactacaagaactgaaagaattgaaaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 attcattccgattcctaaaccactaaaggtaactacaagaactgaaagaattgaaaaaaa 185
Query: 481 gtcttgccaacagaaacaggcaagtgcaagagaaaaggaccatctggcccatctggcacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gtcttgccaacagaaacaggcaagtgcaagagaaaaggaccatctggcccatctggcacc 125
Query: 541 ttttttccattcatttcacctcatttcatgcaatatgcatgtatgtagctcaatgcaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ttttttccattcatttcacctcatttcatgcaatatgcatgtatgtagctcaatgcaaga 65
Query: 601 tgcggttacgttgatctggctaaagcaggtaacgtgactagcaaagggtcctactatctt 660
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tgcggttacgttgatctgg-taaagcaggtaacgtgactagcaaagggtcctactatctt 6
Query: 661 agata 665
|||||
Sbjct: 5 agata 1
>3x_Contig1359
Length = 7536
Score = 550 bits (277), Expect = e-156
Identities = 281/283 (99%)
Strand = Plus / Plus
Query: 658 cttagataagctgataatgtgattgtgtcagaataaaaatagaactagagaaaaagaaaa 717
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cttagataagatgataatgtgattgtgtcagaataaaaatagaactagagaaaaagaaaa 61
Query: 718 ggaaaaacgtgcgcgacgaggctcgagagaagcgtcagattaaattgttaacgacagaat 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggaaaaacgtgcgcgacgaggctcgagagaagcgtcagattaaattgttaacgacagaat 121
Query: 778 gcaggattataaaaaaaacataaagggtttagtggacatactagatctgttgtctcttag 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcaggattataaaaaaaacataaagggtttagtggacatactagatctgttgtctcttag 181
Query: 838 cttcttggcatttagtcctttttgaaagagcacattttaagacacacaagaaacggatat 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cttcttggcatttagtcctttttgaaagagcacattttaagacacacaagaaacggatat 241
Query: 898 ctgtgaataacgtaktttctgccaagtaggaacgatgtggaaa 940
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 242 ctgtgaataacgtagtttctgccaagtaggaacgatgtggaaa 284
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7814
Number of Sequences: 1807
Number of extensions: 7814
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 2
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)